Publications

JOURNAL ARTICLES

Toscani, M., Gegenfurtner, K.R., Doerschner, K., (2017). Differences in illumination estimation in #thedress. Journal of Vision, 17(1), 1-14. doi:10.1167/17.1.22.

Pamir, Z, Boyaci, H (2016). Context-dependent Lightness Affects Perceived Contrast. Vision Research, 124: 24-33. doi: 10.1016/j.visres.2016.06.003.

Turkozer, HB, Pamir, Z, Boyaci, H (2016). Contrast Affects fMRI Activity in Middle Temporal Cortex Related to Center-Surround Interaction in Motion Perception. Frontiers in Psychology, 7:454, 1-8, http://journal.frontiersin.org/article/10.3389/fpsyg.2016.00454/full, doi: 10.3389/fpsyg.2016.00454

Dövencioğlu, D. N., Wijntjes, M. W., Ben-Shahar, O., & Doerschner, K. (2015). Effects of surface reflectance on local second order shape estimation in dynamic scenes. Vision research, 115, 218-230.

Kam, T.E., Mannion, D. , Lee, S.W., Doerschner, K., Kersten, D. (2015). Human visual cortical responses to specular and matte motion flows. Front. Hum. Neurosci. 9:579.

Boyaci, H, Şimşek, MK, Subaşı, E (2014). Effect of contiguity and figure-ground organization on the area rule of lightness. Journal of Vision, 14(13):26, 1-11, http://www.journalofvision.org/content/14/13/26.full, doi: 10.1167/14.13.26

Yilmaz. O., Doerschner, K. (2014). Detection and Localization of Specular Surfaces using Motion Cues, Machine Vision and Applications. Volume 25, Issue 5, pp 1333-1349. doi: 10.1007/s00138-014-0610-9

Akin, B, Ozdem, C, Eroglu, S, Taslak Keskin, D, Fang, F, Doerschner, K, Kersten, D, Boyaci, H. (2014). Attention modulates neuronal correlates of interhemispheric integration and global motion perception. Journal of Vision, 14(12):30, 1-13, http://www.journalofvision.org/content/14/12/30.full, doi:10.1167/14.12.30

Doerschner, K., Yilmaz. O., Kucukoglu, Fleming, R. (2013) Effects of 3D Shape and Surface Reflectance on Perceived Rotation Axis, Journal of Vision, 13(11):8, pp.1-23, doi: 10.1167/13.11.8

Oguz, K. K., Temucin, E., Gocmen, R., Has, A.C., Dolgun, A., Doerschner, K., Alikasifoglu, M. (2013) Assessment of Whole Brain White Matter by DTI in Autosomal Recessive Spastic Ataxia of Charlevoix- Saguenay, AJNR, [Epub ahead of print], doi: 10.3174/ajnr.A3488

Oguz, K. K., Sanverdi, E.,Temucin, C., Turk, S., Haliloglu G., Doerschner, K. (2013) Tract-Based Spatial Statistics of Diffusion Tensor Imaging in Hereditary Spastic Paraplegia with Thin Corpus Callosum Reveals Widespread White Matter Abnormality, Diagnostic and Interventional Radiology, 19(3):181-6. doi: 10.5152/dir.2013.046.

Wijntes, M., Doerschner, K., Kucukoglu, G., Pont, S., (2012) Relative flattening between velvet and matte 3D shapes: evidence for similar shape-from-shading computations. Journal of Vision, 12(1)2, 1-11, http://journalofvision.org/12/1/2/; doi:10.1167/12.1.2.

Behroozi, M., Daliri, M.R., Boyaci, H. (2011). Statistical analysis methods for the fMRI data. Basic and Clinical Neuroscience, 2(4), 67-74.

Gulsuner, S., Tekinay, A.B., Doerschner, K., Boyaci, H., Bilguvar, K., Unal, H., Ors, A., Onat, O.E., Atalar, E., Basak, A.N., Topaloglu, H., Kansu, T., Tan, M., Tan, U., Gunel, M., Ozcelik, T. (2011). Homozygosity mapping and targeted genomic sequencing reveal the gene responsible for cerebellar hy- poplasia and quadrupedal locomotion in a consanguineous kindred. Genome Research, 21, pp. 1995-2003. http://genome.cshlp.org/content/21/12/1995.abstract, doi:10.1101/gr.126110.111

Barak, T. , Kwan, K.Y. , Louvi, A., Demirbilek, V., Saygi, S., Tüysüz, B., Choi, M., Boyaci, H., Doerschner, K., et al. (2011). Recessive LAMC3 mutations cause malformations of occipital cortical development. Nature Genetics, 43, 590-594, http://www.nature.com/ng/journal/v43/n6/full/ng.836.html, doi:10.1038/ng.836.

Doerschner, K., Kersten, D., Schrater, P. (2011). Rapid Classification of Specular and Diffuse Reflection from Image Velocities. Pattern Recognition, 44(9), 1874-1884 http://dx.doi.org/10.1016/j.patcog.2010.09.007

Doerschner, K., Fleming, R., Yilmaz, O., Schrater, P., Hartung, B., Kersten, D., (2011) Visual Motion and the Perception of Surface Material. Current Biology 21(23), 2010-2016; doi:10.1016/j.cub.2011.10.036

Doerschner, K., Maloney, LT, Boyaci, H. (2010). Perceived Glossiness in High Dynamic Range Scenes. Journal of Vision, 10(9):11, 1-11, http://www.journalofvision.org/content/10/9/11.full, doi:10.1167/10.9.11

Boyaci, H., Fang, F., Murray, SO, Kersten, D. (2010). Perceptual grouping-dependent lightness processing in human early visual cortex. Journal of Vision, 10(9):4, 1-12, http://www.journalofvision.org/content/10/9/4.full, doi:10.1167/10.9.4

Doerschner, K., Boyaci, H., Maloney, L.T. (2010). Estimating the glossiness transfer function induced by illumination change and testing its transitivity. Journal of Vision, 10(4):8, 1-9, http://journalofvision.org/10/4/8/, doi:10.1167/10.4.8

Fang, F., Boyaci, H., Kersten, D. (2009). Border ownership selectivity in human early visual cortex and its modulation by attention. Journal of Neuroscience, 29 (2), 460-465. doi:10.1523/JNEUROSCI.4628- 08.200.

Fang, F., Boyaci, H., Kersten, D., and Murray, S.O. (2008). Attention-dependent representation of a size illusion in human V1. Current Biology, 18 (21), 1707-1712. doi:10.1016/j.cub.2008.09.025


CONFERENCE PROCEEDINGS

Zang, D., Schrater, P., and Doerschner, K. (2010). Object Rigidity and Reflectivity Identi.cation Based on Motion Analysis. International Conference on Image Processing (ICIP), Hong Kong September 26-29, 2010. doi10.1109/ICIP.2010.5652288

Doerschner, K., Kersten, D., and Schrater, P. (2009). Rapid Classi.cation of Surface Reflectance from Image Velocities. In Proceedings of the 13th international Conference on Computer Analysis of Images and Patterns (Mnster, Germany, September 02 – 04, 2009). X. Jiang and N. Petkov, Eds. Lecture Notes In Computer Science, vol. 5702. Springer-Verlag, Berlin, Heidelberg, 856-864. http://dx.doi.org/10.1007/978-3-642-03767-2 104

Zang, D., Doerschner, K., and Schrater, P. R. (2009). Rapid Inference of Object Rigidity and Reflectance Using Optic Flow. In Proceedings of the 13th international Conference on Computer Analysis of Images and Patterns (Mnster, Germany, September 02 – 04, 2009). X. Jiang and N. Petkov, Eds. Lecture Notes In Computer Science, vol. 5702. Springer-Verlag, Berlin, Heidelberg, 881-888.http://dx.doi.org/10.1007/978-3-642-03767-2 107

Boyaci, H., Akarun, L. (2008). Bilgisayar ve insanda renkli gorme – Color vision in humans and computers. IEEE 16. Sinyal Isleme, Iletisim ve Uygulamalari Kurultayi – IEEE 16th Signal Processing and Communications Applications Conference, April 20-22 2008, Didim Turkey.

Aksoy, S., Boyaci, H., Gokcay, D. (2008). Nesne tanimada baglam ve anlambilimsel siniflandirmanin onemi: Bilgisayarla gorme ve insanda gorme alanlarindaki calismalar – The importance of context and semantic descriptions in object recognition: Studies in computer vision and human vision. IEEE 16. Sinyal Isleme, Iletisim ve Uygulamalari Kurultayi – IEEE 16th Signal Processing and Communications Applications Con- ference, April 20-22 2008, Didim Turkey.


BOOK CHAPTER

Doerschner, K. (2013). Motion and object appearance. In L. Albertazzi (Ed.), The Wiley-Blackwell Handbook of Experimental Phenomenology; Visual Perception of Shape, Space and Appearance. Wiley – Blackwell. DOI: 10.1002/9781118329016.ch9

Maloney, L.T., Gerhard, H.E., Boyaci, H., & Doerschner, K. (2010). Surface color perception and light field estimation in 3D scenes. In L. Harris & M. Jenkins (Eds.), Vision in 3D environments (pp. 65-88). Cambridge, UK: Cambridge University Press.


CONFERENCE ABSTRACTS

Pamir, Z, Boyaci, H, A neural evidence for dissociation between mechanisms underlying detection and identification tasks [Abstract]. 40th European Conference on Visual Perception. Berlin, Germany, August 27-31, 2017.

Er, G, Pamir, Z, Boyaci, H, Differential patterns of activity in V1 and MT for surround-suppression and surround-summation [Abstract]. 40th European Conference on Visual Perception. Berlin, Germany, August 27-31, 2017.

Urgen, BM, Boyaci, H, Effect of object category prediction on individuation [Abstract]. 40th European Conference on Visual Perception. Berlin, Germany, August 27-31, 2017.

Pamir, Z. Experimental paradigms in fMRI research [Talk]. Annual Meeting of Turkish Magnetic Resonance Imaging Society, fMRI Workshop, Ankara, Turkey, May 25-27, 2017.

Pamir, Z, Boyaci, H, Behavioral and neural correlates of the effect of context-dependent lightness on threshold and suprathreshold contrast perception [Abstract]. Annual meeting of the Society for Neuroscience, San Diego, USA, November 12-16, 2016.

Urgen, BM, Ustun, F.S., Demirayak, P., Karli-Oguz, K., Doerschner, K. [Abstract]. Cortical structural changes and visual functional outcomes associated with homozygous LAMC3 mutation [Abstract]. 14th National Neuroscience Congress (USK), 2016.

Pamir, Z, Boyaci, H, Context-dependent lightness affects perceived contrast at threshold and suprathreshold levels [Abstract]. National Neuroscience Congress, Ankara, Turkey, May 26-29, 2016.

Pamir, Z, Boyaci, H, Context-dependent lightness affects perceived contrast at threshold and suprathreshold levels [Abstract]. Annual Meeting of Vision Science Society (VSS), Florida, USA, May 13-18, 2016.

Pamir, Z, Boyaci, H, The Effect of Context-dependent Brightness on Contrast Perception [Abstract]. 38th European Conference on Visual Perception. Liverpool, UK, August 22-27, 2015.

Urgen, BM, Demirayak, P., Ustun, F.S., Doerschner, K., Visual distraction in a patient with abnormal occipital gyration – an eye-tracking study [Abstract]. Annual Meeting of Vision Sciences Society (VSS), 2015.

Turkozer, HB, Kale, HE, Pamir, Z, Boyaci, H, Ongur, D, Topcuoglu, V, Early integration of visual and audio-visual information in schizophrenia as assessed by contour integration and sound induced flash illusion paradigms [Abstract]. Annual meeting of the Society for Neuroscience, Chicago, USA, October 17-21, 2015.

Urgen, BM, Boyaci, P, Ustun, FS, Oguz, KK, Gilani, I, Boyaci, H, Topac, Y, Doerschner, K. [Abstract]. Morphometric Analysis of the Effects of LAMC3 Mutation on Cortical Structure. Annual Meeting of the Organization for Human Brain Mapping (OHBM), 2014.

Boyaci, P, Gilani, I, Urgen, BM, Ustun, FS, Topac, Y, Oguz, KK, Boyaci, H, Doerschner, K. [Abstract]. Effect of LAMC3 Mutation on White Matter Architecture: a Diffusion Tensor Imaging (DTI) study. Annual Meeting of the Organization for Human Brain Mapping (OHBM), 2014.

Ustun, FS, Boyaci, P, Gilani, I, Urgen, BM, Topac, Y, Boyaci, H, Doerschner, K. [Abstract]. Effects of LAMC3 mutation on default mode network: A resting state fMRI analysis. Annual Meeting of the Organization for Human Brain Mapping (OHBM), 2014.

Gilani, I, Boyaci, P, Boyaci, H, Doerschner, K. Dynamic topographic connectivity profile: Application to connectivity patterns in the human basal ganglia [Abstract]. Annual meeting of the Society for Neuroscience, San Diego, USA, November 2013.

Boyaci, H, Akin, B, Doerschner, K, Eroglu, S, Fang, F, Kersten, D, Ozdem, C, Taslak, D. Perceived global motion-dependent activity in human early visual cortex under two attentional conditions [Abstract]. 36th European Conference on Visual Perception (ECVP), Bremen, Germany, August 25-29, 2013.

Gülban, ÖF, Işık, Aİ, Boyaci, H. Classification of equiluminant color gratings in the human visual cortex with multi-voxel pattern analysis: A color space-free approach [Abstract]. 36th European Conference on Visual Perception (ECVP), Bremen, Germany, August 25-29, 2013.

Turkozer, HB, Pamir, Z, Boyaci H. Cortical Correlates of Motion Surround Suppression in Area MT [Abstract]. 36th European Conference on Visual Perception (ECVP), Bremen, Germany, August 25-29, 2013.

Işık, Aİ, Gülban, ÖF, Boyaci, H. İnsan Görsel Korteksinde Renk Kodlanmasının Çoklu Voksel Örüntü Analizi ile İncelenmesi [Abstract]. Türk Manyetik Rezonans Derneği 18. Yıllık Toplantısı, Ankara, Turkey, May 23-25, 2013.

Gilani, I, Boyaci, P, Boyaci,H, Doerschner, K. Yüksel Çözünürlüklü Bütün Beyin iMRG için 12 Kanallı Kafa Bobini Kullanarak 3T’de Çok Bantlı, Çok Kesitli GE-EPI Optimizasyonu [Abstract]. Türk Manyetik Rezonans Derneği 18. Yıllık Toplantısı, Ankara, Turkey, May 23-25, 2013.

Gilani, I, Boyaci, P, Boyaci,H, Doerschner, K. Çok Bantlı, Çok Kesitli GE-EPI Sekansı Kullanılarak Elde Ediilen Bütün Beyin ve Bazal Ganglia İstirahat Hali Ağları [Abstract]. Türk Manyetik Rezonans Derneği 18. Yıllık Toplantısı, Ankara, Turkey, May 23-25, 2013.

Boyaci, H, Akin, B, Doerschner, K, Eroglu, S, Fang, F, Kersten, D, Ozdem, C, Taslak, D. İnsan erken görsel korteksinde algılanan global harekete dayalı aktivite [Abstract]. Türk Manyetik Rezonans Derneği 18. Yıllık Toplantısı, Ankara, Turkey, May 23-25, 2013.

Turkozer, HB, Pamir, Z, Boyaci H. Hareket algısında çevresel baskılamanın MT (orta temporal) bölgesindeki aktivite ile ilişkisi [Abstract]. Türk Manyetik Rezonans Derneği 18. Yıllık Toplantısı, Ankara, Turkey, May 23-25, 2013.

Shen, H, Mannion, D, Lee, S, Boyaci, H, Fang, F, Kersten, D. Effect of Smooth Shape on Lightness Processing in Human Visual Cortex [Abstract]. The Annual Meeting of the Vision Science Society, Naples, Florida, May 2013.

Boyacı, P, Gilani, I, Örs, A, Gülsüner, S, Uysal, H, Bilgen, R, Doerschner, K, Boyacı, H, Özçelik, T. Doğumsal ayna hareketi bozukluğu (AHB) hastalığında bazal ganglionlar arasında fonksiyonel bağlantı analizi [Abstract]. 2. Nörometabolik dismorfoloji sempozyumu, Istanbul, Turkey, March 8-9, 2013.

Boyaci, H, Subasi, E, Kobal, M. Effect of relative total area on perceived lightness [Abstract]. 35th European Conference on Visual Perception (ECVP), Alghero, Italy, September 2-6, 2012.

Yurdakul, A, Guneyer, D, Kumral, D, Akin, B, Boyaci, H. Farklı uzamsal dikkat şartlarının retinotopik eşleşmeye etkisinin fMRI ile incelenmesi [Abstract]. Türk Manyetik Rezonans Derneği 17. Yıllık Toplantısı, Ankara, Turkey, 24-26 May, 2012.

Boyaci, H, Ors, A., Boyaci, P., Ozcelik, T., Uysal H., Doerschner K. Structural and functional analysis of brains of patients with congenital Mirror Movement Disorder [Abstract]. 41st Annual Meeting of the Society for Neuroscience, Washington DC, November 12-16 2011.

Doerschner, K., Ozcelik, T., Gunel, M., Serap, S., Boyaci, H. Retinotopy and white matter integrity in a patient with occipital pachygyria [Abstract]. 41st Annual Meeting of the Society for Neuroscience, Washington DC, November 12-16 2011.

Yildirim, F. and Boyaci, H. Spatial pattern of activity in primary visual cortex can be modulated by distance perception based on binocular stereo cues [Abstract]. European Conference of Visual Perception (ECVP), Toulouse France, August 28 – September 1, 2011.

Erten, B., Mustafaoglu, N., Boyaci, H. and Doerschner, K. Visual perceptual asymmetries can be modified via visual field deprivation in adult humans[Abstract]. European Conference of Visual Perception (ECVP), August 28 – September 1, 2011, Toulouse France.

Ors, A., Abaci Turk, E., Urgen, BM, Boyaci, H, and Doerschner, K., iMRG ile Duyu Korteksinin İşlevsel Haritalaması [Abstract]. Türk Manyetik Rezonans Derneği 16. Yıllık Toplantısı, İstanbul, 19-21 May, 2011.

Yilmaz,O.,Gevrekci,M.,Boyaci,H and Doerschner,K., Difüzyon Tensör Görüntülemede Süper Çözünürlük [Abstract]. Türk Manyetik Rezonans Derneği 16. Yıllık Toplantısı, İstanbul, 19-21 May, 2011.

Ors, A., Doerschner, K., Gulsuner, S., Uysal, H., Bilgen, R., Ozcelik, T., and Boyaci, H. (2011). Doğumsal Ayna Hareketi Bozukluğu (AHB) Hastalığında Beynin Fonksiyonel ve Morfolojik Analizleri [Abstract]. 10. Ulusal Sinirbilimleri Kongresi, Istanbul, Turkiye, 9-12 April, 2011

Boyaci, H, Doerschner, K, Eroglu, S, Fang, F, Kersten, D, Ozdem, C, Taslak, D (2010). Perception of global form modulates motion responses in human early visual cortex [Abstract]. 40th Annual Meeting of the Society for Neuroscience, San Diego, California, November 13-17, 2010.

Erten, B., Boyaci, H. (2010). Do Vernier acuity thresholds depend on perceived of actual retinal eccentricity? [Abstract]. 33rd European Conference on Visual Perception, Lausanne, Switzerland, August 22-26, 2010.

Doerschner, K., Boyaci, H., Olman, C. A. (2009). Functional properties of V1 neurons coding for luminance histogram skew. European Society for Magnetic Resonance in Medicine and Biology, 26th Annual Scientific Meeting, Antalya, Turkey, October 1-3, 2009.

Boyaci, H., Fang, F., Murray, S. O., Kersten, D. (2009) Perceptual grouping and lightness [Abstract]. Journal of Vision 9 (14). Optical Society of America Fall Vision Meeting, Seattle, Washington, September 24-27, 2009. http://www.journalofvision.org/content/9/14/.

Boyaci, H., Doerschner, K., Murray, S. O. (2009). Shape-dependence of a size illusion explained by spatial mapping in V1 [Abstract]. Journal of Vision, 9(8):38, 38a. The Annual Meeting of the Vision Science Society, Naples, Florida, May 2009. http://journalofvision.org/9/8/38/.

Runeson, E., Boyaci, H., McLaughlin, J., Osterhout, L., Murray, S. (2009). Two representations of object size in early human visual cortex [Abstract]. Journal of Vision, 9(8):37, 37a. The Annual Meeting of the Vision Science Society, Naples, Florida, May 2009. http://journalofvision.org/9/8/37/.

Olman, C., Boyaci, H., Schumacher, J., Fang, F., Doerschner, K. (2009). Receptive field properties of V1 neurons coding for luminance histogram skew [Abstract]. Journal of Vision, 9(8):774, 774a. The Annual Meeting of the Vision Science Society, Naples, Florida, May 2009. http://journalofvision.org/9/8/774/.

Boyaci, H., Fang, F., Murray, S.O., Albanese, G., Kersten, D. (2008). Time course of cortical responses to illusory and real lightness changes [Abstract]. Journal of Vision, 8(6):906, 960a. The Annual Meeting of the Vision Science Society, Naples, Florida, May 2008. http://journalofvision.org/8/6/960/

Fang, F., Boyaci, H., Kersten, D. (2008). Border ownership representation in human early visual cortex and its modulation by attention [Abstract]. Journal of Vision, 8(6):393, 393a. The Annual Meeting of the Vision Science Society, Naples, Florida, May 2008. http://journalofvision.org/8/6/393/

Olman, C., Boyaci, H., Fang, F., Doerschner, K. (2008). V1 responses to different types of luminance histogram contrast [Abstract]. Journal of Vision, 8(6):345, 345a. The Annual Meeting of the Vision Science Society, Naples, Florida, May 2008. http://journalofvision.org/8/6/345/