Events

Published conference abstracts (or extended abstracts)

“Differential miRNA Expression Profile of Bone Marrow Derived Mesenchymal Stem Cells in Fanconi Anemia Patients and Healthy Donors”. Experimental Hematology, Conference: 42nd Annual Scientific Meeting of the International-Society-for-Experimental-Hematology-and-Stem-Cells (ISEH), Vienna, Vol.41(8), Supp.1, S61-S61 August, 2013,  Gunel-Ozcan, A., I. Cagnan, O. Konu., et al.

“Meta-analysis of expression profiles of 5-aza-C treated cancer cells”. New Biotechnology, Vol. 27, S32, 2010. Konu, O., A.R. Ozturk, N. Sayar, I.G. Yulug.

“A Major Role for Senescence and Immortality Gene Network in Hepatocellular Carcinoma”. Hepatology, Conference: 60th Annual Meeting of the American-Association-for-the-Study-of-Liver-Diseases Location: Boston, October, Vol. 50(4), 1086A-1086A, 2009. Arslan-Ergul, A., S. Bagislar, Sevgi, O. Konu, et al.

“MicroRNA Sequence and Expression Database” BMC Systems Biology, BioSysBio 2007: Systems Biology, Bioinformatics and Synthetic Biology Conference Meeting Abstracts, Manchester, 1(Suppl I), S1-P29, 2007. Kaya, K.D., G. Karakulah, C. Yakicier, and O. Konu.

“Oncomining the Receptome for the Genes that are Differentially Expressed in HCC”. FEBS Journal, Special Issue: Abstracts of the 31st FEBS Congress, Istanbul, Vol. 273(s1), 94, 2006. Avcı, M.E., O. Konu, ve T. Yagcı.

“Expression Profiling of Candidate TOR Signalling Components in Zebrafish”. FEBS Journal, Special Issue: Abstracts of the 31st FEBS Congress, Istanbul, Vol. 273(s1), 104, 2006. Dalkic, E., C. Kuscu, C. Sucularli ve O. Konu.

“Phylogenetic Analysis and Expression Profiling of TFDP1 and TFDP1l in Zebrafish”. FEBS Journal, Special Issue: Abstracts of the 31st FEBS Congress, Istanbul, Vol. 273(s1), 134, 2006. Sucularli, C., M. Ozturk ve O. Konu.

“Expression Profiling of BRCA1-Induced Genes in Primary Breast Tumors”. FEBS Journal, Special Issue: Abstracts of the 31st FEBS Congress, Istanbul, Vol. 273(s1), 224, 2006. Gur, B., B. Bozkurt, O. Konu, S. Seckin ve I. Yulug.

“Multivariate Analysis of Expression and Sequence Characteristics of miRNAs”. FEBS Journal, Special Issue: Abstracts of the 31st FEBS Congress, Istanbul, Vol. 273(s1), 247, 2006. Kaya, K.D., O. Konu, C. Yakıcıer.

“Real-time PCR-based Expression Profiling of BRCA1-induced Genes in Primary Breast Tumors”. Breast Cancer Research, The Third International Symposium on the Molecular Biology of Breast Cancer, Molde, 7(Suppl 2), P4.19, 2005. Gur, B., B. Bozkurt, O. Konu, S. Seckin ve I.G. Yulug.

Non-refereed proceedings

Shehwana H., E. Jahja, S. Ozdemir, A. Acikgoz, I. Cagnan, O. Konu. “CHRNA5 as a biomarker of breast cancer”, Winter Retreat, Bilkent University, 16-17 Jan 2015.

Shehwana H., K.D. Kaya, A. Acar, O. Konu. “Conserved microRNA expression patterns between zebrafish and mammals”, Joint Workshop on Molecular Biology, Bilkent University, 25-26 May, 2015.

Ateş-Alagöz Z.,  F. Zengin, M. Yaman, O. Konu, “Synthesis and biological evaluation of novel indole-benzimidazole ethylsulfonyl derivatives as potential anticancer agents”, 11th International Symposium on Pharmaceutical Sciences (ISOPS-11), 9-12 June, 2015.

Ates-Alagoz Z., M. Yaman, F. Zengin, T. Baydin, O. Konu, “Screening Of Anticancer Activity And In Vivo Toxicity Of Novel Indolebenzimidazole Ethylsulfonyl Derivatives”, The 9th European Zebrafish Meeting, Oslo, Norway, 28 June-2 July, 2015.

Shehwana H. and O. Konu, “Statistical analysis of expression divergence in paralogous zebrafish genes”, Ecology and Evolutionary Biology Symposium, METU, Turkey (EEBST), 6-7 August 2015.

Coban B., H. Shehwana, S. Targen, O. Konu, ''Mineralocorticoid and Glucocorticoid Receptor Driven Gene Expression Network in Breast Cancer Diagnosis and Prognosis'' ADMIRE Conference: ''Aldosterone,MR and salt: What's new?'', Zermatt Switzerland, 7-11 October, 2015.

Zengin F., M. Yaman, O. Konu, Z. Ateş-Alagöz, “Design, syntheses and anticancer activity of           5-(Alkylsulfonyl)-2-(5-Subs-1H-Indol-3-YL)-1-Subs-1H-Benzo[d]imidazoles”,         1st International Gazi Pharma Symposium Series, Antalya, Turkey, 12-15 November 2015.

Ozgursoy B., F. Valipour, E. Jahja, S. Cingir Koker, M. Yilmaz and O. Konu, “CHRNA5 driven integrated mRNA-microRNA networks in breast cancer”, METU MolBiyoKon2015 / IV. International Congress of the Molecular Biology Association of Turkey, 27-29 November 2015.

Avcı M.E., M.E. Işılak, H.G. Akçay, U. Değirmenci, A. Karabulut, İ. Çelik, M. Adams, Ö. Konu, “Host acetylcholinesterase deficiency enhances human liver tumor development in a novel zebrafish xenograft model”, METU MolBiyoKon2015 / IV. International Congress of the Molecular Biology Association of Turkey, 27-29 November 2015. 

Konu, O., Shehwana, H., and Jahja, E. The Role of Cholinergic Receptor Alpha 5 (CHRNA5) in Expression of Cellular Clearance Pathways. FEBS Advanced Lecture Course: 360° Degree Lysosome, 23-28 October 2014, Izmir, Turkey. 

Konu O.,  Shehwana, H., Ozdemir, S.E., Acikgoz, A.A. “Meta-analysis of microarray datasets reveals diagnostic and prognostic significance of NR3C2 expression in breast cancer.”  ADMIRE COST Meeting. Padua Italy, October 16-19, 2014.

Ozdemir, S., Shehwana, H., Konu, O. “qPcr Validation Of Diagnostic Importance And Regulation By Estrogen Of Chrna5 Isoform Expression In Breast Cancer”, 3rd International Congress of the Molecular Biology Association of Turkey, Izmir Institute of Technology, Izmir, 10-12 September, 2014.

Doldur Ballı F., Ozel M.N., Gulsuner S., Tekinay A.B., Ozcelik T., Konu O., and Adams M.M. Functional Characterization of a Novel Zebrafish (Danio rerio) gene, wdr81, Associated with Cerebellar Ataxia, Mental Retardation and Dysequilibrium Syndrome (CAMRQ) 8th European Zebrafish Meeting in Barcelona, Spain, 07/13.

Arslan-Ergul A., Erkaya B., Altaytas F., Halim D., O. Konu, and Adams M.M. Zebrafish (Danio rerio) Brain Aging Has a Sexually Dimorphic Pattern, 8th European Zebrafish Meeting in Barcelona, Spain, 07/13.

Ozdemir S., E. Jahja, O. Konu. Meme kanseri hasta cDNA panelinde CHRNA5 (kolinerjik reseptör nikotin alfa 5) izoform spesifik ifadesinin tanıdaki önemi. XIII. Ulusal Tıbbi Biyoloji ve Genetik Kongresi. Kusadası Aydın. 27-30 October 2013.

Avci E., G. Akcay, A. Karabulut, M. Adams, M. Ozturk. O. Konu. A Novel Hepatocellular Carcinoma Xenograft Model in Zebrafish. MolbioKon 2013. 2nd International Congress of the Molecular Biology Association of Turkey. Istanbul, 22-23 November. 2013. p.118.

Bener G., B. Harmanda, A. Acikgoz, O. Konu. Expression Analysis of DEPDC1 and C12ORF48 in Solid Cancers. MolbioKon 2013. 2nd International Congress of the Molecular Biology Association of Turkey. Istanbul, 22-23 November. 2013. p.78.

Acıkgoz A., Jahja E. Olmezer G., Konu O. Analysis of Cholinergic Nicotinic Receptor Alpha 5 (CHRNA5) mRNA Expression in Mammalian Tissues and Human Breast Cancer Cell Lines. 1st Conference of Turkish Molecular Biology Association. Bogazici University. 23-24 November, 2012.

Avci E., Acikgoz A., Konu O. Analysis of Acetyl- and Butyryl-Choline Esterase Gene Expression In Human Hepatocellular and Breast Carcinoma Cells. 1st Conference of Turkish Molecular Biology Association. Bogazici University. 23-24 November, 2012. p.58.

Ozel N., Gulsuner S., Konu, O., Ozcelik, T., Adams, M. 2011. “Characterization of a novel Zebrafish (Danio rerio)protein-coding gene with highly conserved WD40 repeats and a BEACH domain”. 7th European Zebrafish Meeting, Edinburgh, Scottland, 5-9 July, 2011.

Sucularli, C., C. Neuman, ve O. Konu, “The Molecular and Developmental Effects of Rapamycin on Zebrafish Embryos and ZF4 Cell Line,” 8th International Meeting on Zebrafish Development and Genetics, Madison, WI, p.601, 2008. 

Konu, O., K.D. Kaya, G. Karakulah, ve C. Yakicier, “miRNA Sequence and Expression Database,” 15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), Vienna, Austria, Poster No. 64, 2007.

Carkacioglu, L., T. Can, O. Konu, V. Atalay, ve R. Cetin-Atalay, "Expression Pattern Analysis of Housekeeping Genes Across Large Number of Microarray Experiments," 5th European Conference on Computational Biology (ECCB), Eliat, Israel, January 21-24, http://www.eccb06.org/new_pages/program/accepted_posters_P.html, 2007.

Bagislar, S., N. Ozturk, A. Arslan-Ergul, B. Bilen, H. Ozdag, G. Ilk, O. Ilk, N. Akar, O. Konu, ve M. Ozturk, "Gene Expression Profiles Reveal Common Features Between Reversal of Hepatocellular Malignancy and Cellular Senescence,” Book of Abstracts-ILCA Inaugural Annual Conference, Barcelona, p.15, www.ilca-online.org, 2007.

Acun, T., E. Terzioglu, O. Konu, M. Ozturk, H. Bozkaya, ve C. Yakicier, "MDM2 SNP309 G Allele and p53 Mutations are Mutually Exclusive in Human Hepatocellular Carcinomas,” Book of Abstracts-ILCA Inaugural Annual Conference, Barcelona, p.21, www.ilca-online.org, 2007.

Avcı, M.E., O. Konu, T. Yagcı, "Differential expression of Slit-Robo genes in cells derived from hepatocellular carcinoma,” Book of Abstracts-ILCA Inaugural Annual Conference, Barcelona, p.76, www.ilca-online.org, 2007.

Akilli-Ozturk, O., B. Gur, O. Konu, ve I.G. Yulug, "Real-Time Quantitative RT-PCR Gene Expression Profile of Hedgehog Signaling Pathway in Epithelial Cancer Cell Lines," Program|Proceedings of the 19th Meeting of the European Association of Cancer Research, p.105, Budapest, Hungary, 1-4 July, 2006.

Ozdemir, P., B. Gur, B. Bozkurt, S. Seckin, N. Ozturk, O. Konu, M. Ozturk, ve I.G.Yulug, "Expression Pattern of the Genes that are Differentialy Expressed in Replicative Senescence Cells in the Primary Breast Tumors," ISREC Conference on Cancer Research, p.79, Lausanne, Switzerland, 11-13 October, 2006.

Gur, B., O. Konu, S. Kir, A. R. Ozturk, ve I.G. Yulug. "A Resampling Based Meta-Analysis for Detection of Differential Gene Expression in Breast Cancer," Poster, Program|Proceedings of the 19th Meeting of the European Association of Cancer Research, p.110, Budapest, Hungary, 1-4 July, 2006.

Dalkıc, E., C. Kuscu, ve O. Konu, “Identification and Differential Expression of an Alternatively Spliced Form of Robo2 in Zebrafish,” Poster, 6th International Meeting on Zebrafish Development and Genetics, Madison, WI, p.181, 2006.